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forkedTF
Representing Transcription Factor Dimer Binding Sites Using Forked-Position Weight Matrices and Forked-Sequence Logos
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NanoVar
Structural variant caller using low-depth Nanopore sequencing
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TFRegulomeR
Flexible characterization of transcription factor binding partners and binding motifs using cell specificity and DNA methylation profiles
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MethMotif
An integrative cell-specific database of transcription factor binding motifs coupled with DNA methylation profiles
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miREM
An expectation-maximization-based approach for prioritizing miRNAs associated with gene sets
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GBSA
Genome Bisulfite Sequencing Analyser
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Pasha
Preprocessing of Aligned Sequences from HTS
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CoCAS
ChIP-on-Chip Analysis Suite
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