Software & Database


forkedTF
Representing Transcription Factor Dimer Binding Sites Using Forked-Position Weight Matrices and Forked-Sequence Logos
NanoVar
Structural variant caller using low-depth Nanopore sequencing
TFRR
TFRegulomeR
Flexible characterization of transcription factor binding partners and binding motifs using cell specificity and DNA methylation profiles
MethMotif_database
MethMotif
An integrative cell-specific database of transcription factor binding motifs coupled with DNA methylation profiles

mirem

miREM
An expectation-maximization-based approach for prioritizing miRNAs associated with gene sets

gbsa

GBSA
Genome Bisulfite Sequencing Analyser
pasha
Pasha
Preprocessing of Aligned Sequences from HTS
cocas
CoCAS
ChIP-on-Chip Analysis Suite