Our multi-disciplinary laboratory focuses on omics interplay mechanisms in physiopathology.
Our hybrid (wet & dry) laboratory develops computational methods and an integrative database for sequencing analyses and omics interplay mining. Overall, our research on pan-omics analytics is divided into three axes:
A transcription factor binding motifs database coupled with DNA methylation profiles
Biologie computationnelle des systèmes
9 Novembre 2022 à 14h
Université Saint Joseph de Beyrouth
Module MED 6591
November 29th 2022, 2.00pm – 5.00pm
Memorial University of Newfoundland
Class of 2025 / Phase 3 Schedule
Future of Genetics
January 20th, 2023 11.30am (1M101)
Memorial University of Newfoundland
Module CDM5104
January 27th 2023 4.00pm – 6.00pm.
National University of Singapore
Modules MED6400 / MED6412
January 23rd – April 14th, 2023 12.00pm – 1.30pm. (schedule available on D2L)
Memorial University of Newfoundland
Group Leader
Canada Research Chair in Bioinformatics for Personalised Medicine & Assistant Professor | Division of BioMedical Sciences, Faculty of Medicine, Memorial University of Newfoundland
Visiting Assistant Professor & co-Head: Genomics and Data Analytics Core (GeDaC) at the Cancer Science Institute of Singapore, National University of Singapore
MoH-TFRI / MITACS Post Doctoral Fellow
Omics in Colorectal Cancer
PhD Student (Neuro – Qi lab)
Alzheimer’s single cell omics interplays
PhD Student (Genetics)
DNA methylation dynamics
MethMotif maintenance
PhD student (Genetics)
Characterization of structural variants and repetitive elements
PhD Student (Neuro – Qi lab)
Dynamics of single-cell brain epigenomics during fear communication
Master’s Students (Genetics)
Transcription factors and DNA methylation interplays
Master’s Student (Comp. Sci.)
Z-stack images processing
Master’s Student (Genetics)
Microbiome analysis
Pipeline development
Master’s Student (Genetics)
Computational epigenomics methods
Professional Associate (Invited)
Full-stack software developer
Seminar on structural variations in Leukemia. Invited speakers: Touati Benoukraf.
TAGC, Aix-Marseille University, France | December 16, 2022
Conference on Microbiome. Poster presentation: Akinola A. Alafiatayo.
Cold Spring Harbor, NY, USA | October 25 – 29, 2022
Invited speaker (TB) at the Toronto Bioinformatics Users Group seminar.
Toronto, ON, Canada | Feb. 24th, 2021.
Epigenetics in Cancer Symposium 2021. Our team is invited to talk (TB) and Matthew is presenting a poster on MethMotif.org.
NUS – Singapore | Feb. 15-17, 2021